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http://nopr.niscpr.res.in/handle/123456789/29092| Title: | Deciphering the binding modes of hematoporphyrin to bovine serum albumin |
| Authors: | Ahmed, Mohammed Guleria, Apurav Singh, Ajay K Bandyopadhyay, Tusar Sarkar, Sisir K |
| Keywords: | Fluorescence quenching;Bovine serum albumin;Hematoporphyrin;Fluorescence resonance energy transfer;Molecular docking;Molecular dynamics simulation |
| Issue Date: | Jun-2014 |
| Publisher: | NISCAIR-CSIR, India |
| Abstract: | Interaction of proteins with small molecules
is important in understanding delivery and transport of different therapeutic
agents, including drugs. In the present study, we investigated the interaction
between hematoporphyrin (HP), the principal component of photosensitizing drug
with bovine serum albumin (BSA) in aqueous buffer solution using UV-Vis
absorption spectroscopy and fluorescence measurements. The results were further
substantiated by molecular docking and molecular dynamics (MD) simulation. Our
results revealed that fluorescence of BSA was dominantly quenched by the
ground-state complex formation with HP accompanied by the electronic energy
transfer (EET) to the later. We experimentally determined the thermodynamic
parameters such as G0,
H0, and S0
for the HP-BSA system which were -35.5 kJ mole-1,
-56.4 kJ mole-1 and -0.06 kJ
mole-1 K-1, respectively. These parameters suggested
hydrogen-bonding and Van der Waals forces playing major role in the
complexation. This was also supported by the binding energy parameters
calculated by molecular docking. Moreover, the experimentally determined G0 nicely correlated with those determined by molecular
docking and MD-simulation. Further, computational results clearly showed that
the binding of HP with BSA in the subdomains IB and IIA.
|
| Page(s): | 175-187 |
| ISSN: | 0975-0959 (Online); 0301-1208 (Print) |
| Appears in Collections: | IJBB Vol.51(3) [June 2014] |
Files in This Item:
| File | Description | Size | Format | |
|---|---|---|---|---|
| IJBB 51(3) 175-187.pdf | 1.13 MB | Adobe PDF | View/Open |
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G0,